J Integr Plant Biol board

Dr. Hailing Jin

Department of Plant Pathology and Microbiology
Center for Plant Cell Biology
Institute for Integrative Genome Biology
University of California
Riverside, CA 92521
USA
E-mail: hailingj@ucr.edu
http://plantpath.ucr.edu/people/faculty/jin.html
http://cepceb.ucr.edu/people/jin.html
Area of expertise: The role of small RNAs and epigenetics in plant immunity; molecular plant-microbial interaction

Selected Publications:

He, B.Y., Cai, Q., Qiao, L.L., Huang, C.Y., Wang, S.M., Miao, W.L., Ha, T., Wang, Y.S., and Jin, H.L. RNA-binding proteins contribute to small RNA loading in plant extracellular vesicles. Nat. Plants. 7: 342-352

Huang, C.Y., Araujo, K., Sanchez, J.N., Kund, G., Trumble, J., Roper, C., Godfrey, K.E., and Jin, H.L. (2021). A stable antimicrobial peptide with dual functions of treating and preventing citrus Huanglongbing. Proc. Natl. Acad. Sci. USA 118: e2019628118

Huang, C.Y., Rangel, D.S., Qin, X.B., Bui, C., Li, R.D., Jia, Z.Y., Cui, X.P., and Jin, H.L. (2021). The chromatin-remodeling protein BAF60/SWP73A regulates the plant immune receptor NLRs. Cell Host Microbe 29:425-434

Cai, Q., Qiao, L.L., Wang, M., He, B.Y., Lin, F.M., Palmquist, J., Huang, S.N.D., and Jin, H.L. (2018). Plants send small RNAs in extracellular vesicles to fungal pathogen to silence virulence genes. Science 360: 1126-1129.

Zhang, X., Bao, Y.L., Shan, D.Q., Wang, Z.H., Song, X.N., Wang, Z.Y., Wang, J.S., He, L.Q., Wu, L., Zhang, Z.G., Niu, D.D., Jin, H.L., and Zhao, H.W. (2018). Magnaporthe oryzae induces the expression of a MicroRNA to suppress the immune response in rice. Plant Physiol. 177: 352-368.

Niu, D.D., Lii, Y.E., Chellappan, P., Lei, L., Peralta, K., Jiang, C.H., Guo, J.H., Coaker, G., and Jin, H.L. (2016). miRNA863-3p sequentially targets negative immune regulator ARLPKs and positive regulator SERRATE upon bacterial infection. Nat. Commun. 7:11324.

Niu, D.D., Xia, J., Jiang, C.H., Qi, B.B., Ling, X.Y., Lin, S.Y., Zhang, W.X., Guo, J.H., Jin, H.L., and Zhao, H.W. (2016). Bacillus cereus AR156 primes induced systemic resistance by suppressing miR825/825*and activating defense-related genes in Arabidopsis. J. Integr. Plant Biol. 58: 426-439.

Weiberg, A., and Jin, H.L. (2015). Small RNAs - the secret agents in the plant-pathogen interactions. Curr. Opin. Plant Biol. 26: 87-94.

Hall, M.A., Verma, A., Brown-Gentry, K.D., Goodloe, R., Boston, J., Wilson, S., McClellan, B., Sutcliffe, C., Dilks, H.H., Gillani, N.B., Jin, H.L., Mayo, P., Allen, M., Schnetz-Boutaud, N., Crawford, D.C., Ritchie, M.D., and Pendergrass, S.A. (2014). Detection of Pleiotropy through a Phenome-Wide Association Study (PheWAS) of Epidemiologic Data as Part of the Environmental Architecture for Genes Linked to Environment (EAGLE) Study. PLoS Genet. 10: e1004678.

Jin, H.L. (2014). From genomics and epigenomics to finding hidden regulators. Genome Biol. 15: 302.

Zhang, X., Xia, J., Lii, Y., Barrera-Figueroa, B., Zhou, X., Gao, S., Lu, L., Niu, D., Liang, W., Chen, Z., Leung, C., Wong, T., Zhang, H., Guo, J., Li, Y., Liu, R., Zhu, J.K., Zhang, W., and Jin, H. (2012). Genome-wide analysis of plant nat-siRNAs reveals insights into their distribution, biogenesis and function. Genome Biol. 13: R20.

Zhang, X., Zhao, H., Gao, S., Wang, W.C., Katiyar-Agarwal, S., Huang, H.D., Raikhel, N., and Jin, H. (2011). Arabidopsis Argonaute 2 regulates innate immunity via miRNA393*-mediated silencing of a Golgi-localized SNARE gene MEMB12. Mol. Cell 42: 356–366.

Zhang, W., Gao, S., Zhou, X., Chellappan, P., Chen, Z., Zhou, X., Zhang, X., Fromuth, N., Coutino, G., Coffey, M., and Jin, H. (2011). Bacterial-responsive microRNAs regulate plant innate immunity by modulating plant hormone networks. Plant Mol. Biol. 75: 93–105.

Zhang, W., Gao, S., Zhou, X., Xia, J., Chellappan, P., Zhou, X., Zhang, X., and Jin, H. (2010). Multiple distinct small RNAs originated from the same microRNA precursors. Genome Biol. 11: R81.

Chellappan, P., Xia, J., Zhou, X., Gao, S., Zhang, X., Coutino, G., Vazquez, F., Zhang, W., and Jin, H. (2010). siRNAs from miRNA sites mediate DNA methylation of target genes. Nucleic Acid. Res. 38: 6883–6894.

Jin, H., and Zhu, J.K. (2010). A viral suppressor protein inhibits host RNA silencing by hooking up with Argonautes. Genes. Dev. 24: 853–856.

Jin, H., and Zhu, J.K. (2010) How many ways are there to generate small RNAs? Mol Cell 38: 775–777.

Katiyar-Agarwal, S., and Jin, H. (2010). Role of small RNAs in host-microbe interactions. Annu. Rev. Phytopathol. 48: 225–246.

Padmanabhan, C., Zhang, X., and Jin, H. (2009). Host small RNAs are big contributors in plant innate immunity. Curr. Opin. Plant Biol. 12: 465–72.

Zhou, X., Sunkar, R., Jin, H., Zhu, J.K., and Zhang, W. (2009). Genome-wide identification and analysis of small RNAs originated from natural antisense transcripts in Oryza sativa. Genome Res. 19: 70–78.

Jin, H., Vacic, V., Girke, T., Lonardi, S., and Zhu, J.K. (2008). Small RNAs and the regulation of cis-natural antisense transcripts in Arabidopsis. BMC Mol. Biol. 14: 9:6.

Jin, H. (2008). Endogenous small RNAs And antibacterial immunity in plants. FEBS. Let. 582: 2679–2684.

Katiyar-Agarwal, S., Gao, S., Vivian-Smith, A., and Jin, H. (2007). A novel class of bacteria-induced small RNAs in Arabidopsis. Genes Dev 21: 3123–3134.

Katiyar-Agarwal, S., Morgan, R., Dahlbeck, D., Borsani, O., Villegas, A. Jr., Zhu, J.K., Staskawicz, B., and Jin, H. (2006). A pathogen-inducible endogenous siRNA in plant immunity. Proc. Natl. Acad. Sci. USA 103: 18002–18007.

Jin, H., Li, S., and Villegas, A. Jr. (2006) Down regulation of 26S proteasome subunit RPN9 inhibits viral systemic transport and alters plant vascular development. Plant Physiol 142: 651–661.

Jin, H., Axtell, M.J., Dahlbeck, D., Ekwenna, O., Zhang, S., Staskawicz, B., and Baker, B. (2002). NPK1, an MEKK1-like mitogen-activated protein kinase kinase kinase, regulates innate immunity and development in plants. Dev. Cell 3: 291–297.

Jin, H., Liu, Y., Yang, K.Y., Kim, C.Y., Baker, B., and Zhang, S. (2003). Function of a mitogen-activated protein kinase pathway in N gene-mediated resistance in tobacco. Plant J 33: 719–731.

Jin, H., Cominelli, E., Bailey, P., Parr, A., Mehrtens, F., Tonelli, C., Weisshaar, B., and Martin, C. (2000).Transcriptional repression by AtMYB4 controls production of UV-protecting sunscreens in Arabidopsis. EMBO J 19: 6150–6161.

Meissner, R.C., Jin, H., Cominelli, E., Denekamp, M., Fuertes, A., Greco, R., Kranz, H.D., Penfield, S., Petroni, K., Urzainqui, A., Martin, C., Paz-Ares, J., Smeekens, S., Tonelli, C., Weisshaar, B., Baumann, E., Klimyuk, V., Marillonnet, S., Patel, K., Speulman, E., Tissier, A.F., Bouchez, D., Jones, J.J., Pereira, A., and Wisman, E. (1999). Function search in a large transcription factor gene family in Arabidopsis: Assessing the potential of reverse genetics to identify insertional mutants in R2R3 MYB genes. Plant Cell 11: 1827–1840.

Jin, H., and Martin, C. (1999) Multifunctionality and diversity within the plant MYB-gene family. Plant Mol Biol 41: 577–585.

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PROMOTIONS