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Department of Agriculture
Guangxi University, Nanning, China
E-mail: zjisen@126.com
http://www.zhangjisenlab.cn/
Area of expertise: (1) Genomics of Sugarcane and Other Subtropical Crops; (2) Sugarcane germplasm innovation and key gene mining; (3) Molecular breeding of Sugarcane
Selected Publications:
Zhang, J., Zhang, X., Tang, H., Zhang, Q., Hua, X., Ma, X., Zhu, F., Jones, T., Zhu, X., Bowers, J., Wai, C.M., Zheng, C., Shi, Y., Chen, S., Xu, X., Yue, J., Nelson, D.R., Huang, L., Li, Z., Xu, H., Zhou, D., Wang, Y., Hu, W., Lin, J., Deng, Y., Pandey, N., Mancini, M., Zerpa, D., Nguyen, J.K., Wang, L., Yu, L., Xin, Y., Ge, L., Arro, J., Han, J.O., Chakrabarty, S., Pushko, M., Zhang, W., Ma, Y., Ma, P., Lv, M., Chen, F., Zheng, G., Xu, J., Yang, Z., Deng, F., Chen, X., Liao, Z., Zhang, X., Lin, Z., Lin, H., Yan, H., Kuang, Z., Zhong, W., Liang, P., Wang, G., Yuan, Y., Shi, J., Hou, J., Lin, J., Jin, J., Cao, P., Shen, Q., Jiang, Q., Zhou, P., Ma, Y., Zhang, X., Xu, R., Liu, J., Zhou, Y., Jia, H., Ma, Q., Qi, R., Zhang, Z., Fang, J., Fang, H., Song, J., Wang, M., Dong, G., Wang, G., Chen, Z., Ma, T., Liu, H., Dhungana, S.R., Huss, S.E., Yang, X., Sharma, A., Trujillo, J.H., Martinez, M.C., Hudson, M., Riascos, J.J., Schuler, M., Chen, L.Q., Braun, D.M., Li, L., Yu, Q., Wang, J., Wang, K., Schatz, M.C., Heckerman, D., VanSluys, M.A., Souza, G.M., Moore, P.H., Sankoff, D., VanBuren, R., Paterson, A.H., Nagai, C., and Ming, R. (2018). Allele-defined genome of the autopolyploid sugarcane Saccharum spontaneum L. Nat. Genet. 50: 1565–1573.
Zhang, Q., Qi, Y., Pan, H., Tang, H., Wang, G., Hua, X., Wang, Y., Lin, L., Li, Z., Li, Y., Yu, F., Yu, Z., Huang, Y., Wang, T., Ma, P., Dou, M., Sun, Z., Wang, Y., Wang, H., Zhang, X., Yao, W., Wang, Y., Liu, X., Wang, M., Wang, J., Deng, Z., Xu, J., Yang, Q., Liu, Z., Chen, B., Zhang, M., Ming, R., and Zhang, J. (2022). Genomic insights into the recent chromosome reduction of autopolyploid sugarcane Saccharum spontaneum. Nat. Genet. 54: 885–896
Wang, T., Wang, B., Hua, X., Tang, H., Zhang, Z., Gao, R., Qi, Y., Zhang, Q., Wang, G., Yu, Z., Huang, Y., Zhang, Z., Mei, J., Wang, Y., Zhang, Y., Li, Y., Meng, X., Wang, Y., Pan, H., Chen, S., Li, Z., Shi, H., Liu, X., Deng, Z., Chen, B., Zhang, M., Gu, L., Wang, J., Ming, R., Yao, W., and Zhang, J. (2023). A complete gap-free diploid genome in Saccharum complex and the genomic footprints of evolution in the highly polyploid Saccharum genus. Nat. Plants 9: 554–571.
Chen, D., Zhang, Q., Tang, W., Huang, Z., Wang, G., Wang, Y., Shi, J., Xu, H., Lin, L., Li, Z., Chi, W., Huang, L., Xia, J., Zhang, X., Guo, L., Wang, Y., Ma, P., Tang, J., Zhou, G., Liu, M., Liu, F., Hua, X., Wang, B., Shen, Q., Jiang, Q., Lin, J., Chen, X., Wang, H., Dou, M., Liu, L., Pan, H., Qi, Y., Wu, B., Fang, J., Zhou, Y., Cen, W., He, W., Zhang, Q., Xue, T., Lin, G., Zhang, W., Liu, Z., Qu, L., Wang, A., Ye, Q., Chen, J., Zhang, Y., Ming, R., Van Montagu, M., Tang, H., Van de Peer, Y., Chen, Y., and Zhang, J. (2020). The evolutionary origin and domestication history of goldfish (Carassius auratus). Proc. Natl. Acad. Sci. U S A. 117: 29775–29785.
Zhang, J., Zhang, Q., Li, L., Tang, H., Zhang, Q., Chen, Y., Arrow, J., Zhang, X., Wang, A., Miao, C., and Ming, R. (2019). Recent polyploidization events in three Saccharum founding species. Plant Biotechnol. J. 17: 264–274.
Jiang, Q., Hua, X., Shi, H., Liu, J., Yuan, Y., Li, Z., Li, S., Zhou, M., Yin, C., Dou, M., Qi, N., Wang, Y., Zhang, M., Ming, R., Tang, H., and Zhang, J. (2023). Transcriptome dynamics provides insights into divergences of the photosynthesis pathway between Saccharum officinarum and Saccharum spontaneum. Plant J. 113: 1278–1294.
Wu, W., Li, J., Wang, Q., Lv, K., Du, K., Zhang, W., Li, Q., Kang, X., and Wei, H. (2021). Growth-regulating factor 5 (GRF5)-mediated gene regulatory network promotes leaf growth and expansion in poplar. New Phytol. 230: 612–628.
Ma, L., Liu, K.W., Li, Z., Hsiao, Y.Y., Qi, Y., Fu, T., Tang, G.D., Zhang, D., Sun, W.H., Liu, D.K., Li, Y., Chen, G.Z., Liu, X.D., Liao, X.Y., Jiang, Y.T., Yu, X., Hao, Y., Huang, J., Zhao, X.W., Ke, S., Chen, Y.Y., Wu, W.L., Hsu, J.L., Lin, Y.F., Huang, M.D., Li, C.Y., Huang, L., Wang, Z.W., Zhao, X., Zhong, W.Y., Peng, D.H., Ahmad, S., Lan, S., Zhang, J.S., Tsai, W.C., Van de Peer, Y., and Liu, Z.J. (2023). Diploid and tetraploid genomes of Acorus and the evolution of monocots. Nat. Commun. 14: 3661
Selected Registered Patents
Zhang, J.S., Liu, L., Wang, H.B., Wang, G. and Dou, M.J. A SSR marker for distinguishing the genetic background of sugarcane interspecies Chromosome 2 and its application. Patent No. ZL 2020 1 0672153.6, China
Zhang, J.S., Liu, L., Wang, H.B., Wang, G. and Dou, M.J. A SSR marker for distinguishing the genetic background of sugarcane interspecies Chromosome 3 and its application. Patent No. ZL 2020 1 0672152.1, China.
Zhang, J.S., Wang, G., Lin, X.J., Dou, M.J., Wang, Y.Y., Guo, L. and Chang, X.G. A strain of shiitake mushroom and its breeding method. Patent No. ZL 2019 10538171.2, China.
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