J Integr Plant Biol

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CRISPR/dCas9-based proximity labeling reveals the upstream regulators of RbohB under salt stres in soybean

Tong Chen, Suyu Huang, Qinhui Hu, Qian Zhou, Mengyu Zhang, Qiang Li, Shuo Li, Fengning Xiang, Qing Lu

doi: 10.1111/jipb.70357

Version of Record online: 22 July 2026

A DNA-targeted protein labeling method based on CRISPR/dCas9 was developed for soybean and used to identify two regulators that enhance salt tolerance by activating the respiratory burst oxidase homolog gene GmRbohB1, a key player in salt-induced reactive oxygen species signaling.

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Integrating molecular networks and physiological adaptation for heat-resilient crops

Liangxing Guo, Junxiang Ruan, Qin Yu, Youshun Lin

DOI: 10.1111/jipb.70354

Version of Record online: 21 July 2026

This review integrates molecular networks and physiological adaptation to reveal how heat stress disrupts source-sink dynamics in crops, and highlights key thermotolerance genes and regulatory modules that enable precision breeding of heat-resilient varieties, thereby providing a roadmap for safeguarding global food security under climate warming.

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PMGD: A comprehensive database of plant mitochondrial genomes

Xiaoyue Yang, Yuebo Ren, Hang Yin, Zihao Zhao, Binyu Shuai, Ning Sun, Yuanjian Wang, Kewang Xu, Xiangui Yi, Lei Jiang, Changwei Bi, Zefu Wang

doi: 10.1111/jipb.70356

Version of Record online: 21 July 2026

PMGD is the first specialized database for plant mitochondrial genomes. Housing 1,829 genomes from 1,307 species across five major plant lineages, it provides standardized high-quality data and built-in tools (BLAST, JBrowse, and phylogenetic analysis). This user-friendly platform will support studies on plant diversity, phylogeny, and genome evolution.

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Plant G proteins: Versatile signaling hubs for synergistic improvement of agronomic traits

Haoran Li, Zhilong Zhang, Fangyuan Liu, Haonan Wang, Zebiao He, Sanyuan Tang, Xiaojing Dong, Peng Xie

doi: 10.1111/jipb.70351

Version of Record online: 20 July 2026

This review highlights the roles of G-protein signaling in crop yield and quality, as well as abiotic and biotic stress responses. It also discusses the feasibility of breaking the trade-off between plant growth and stress tolerance via dissecting G-protein regulatory pathways, gene editing, mining natural elite variants, and AI-assisted breeding.

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Vm00799 enhances pathogenicity through the MdTCP7–MdERF1B–ethylene signaling module and drives virulence differences between Valsa mali and V. pyri on apple

Yanting He, Yanan Tang, Weimin Ma, Runze Tian, Chengyu Gao, Chen Li, Gao Zhang, Guozhi Bi, Hao Feng, Lili Huang

DOI: 10.1111/jipb.70352

Version of Record online: 19 July 2026

The Valsa mali-specific secreted protein Vm00799 enhances pathogenicity through the MdTCP7-MdERF1B-ethylene signaling module and drives virulence differences between V. mali and V. pyri on apple, thus offering targets for breeding resistance and designing control strategies.

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A novel Cas12b cytosine base editor enables efficient C-to-T base editing in the rice genome

Yulei Wei, Lin He, Jienan Han, Shengnan Ge, Xueheyuan Wang, Xinyu Liu, Jie Deng, Haiyang Zhang, Xinyang Che, Jianfeng Weng, Wujun Ma, Jingyu Xu

doi: 10.1111/jipb.70355

Version of Record online: 19 July 2026

The base editor dAaCas12b accurately induces C-to-T mutations in rice. It recognizes unique TTTV DNA motifs with a wider editing window, and its optimized guide RNA boosts efficiency, expanding crop gene-editing resources.

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Creation of dual-purpose sorghum by CRISPR/Cas9-mediated knockout of Dry gene

Fengyong Ge, Wenzhe Zhang, Kangxu Zhao, Baye Wodajo, Ran Xia, Feifei Yu, Qi Xie

doi: 10.1111/jipb.70353

Version of Record online: 19 July 2026

CRISPR/Cas9 knockout of the Dry gene in the grain sorghum cultivar LNH19 leads to a juicy stem with higher sugar content, which results in improved forage digestibility and straw decomposition in soil, along with increased grain yield.

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CP32, a novel anti-oomycete cyclic peptide, interferes with cell-wall deposition in Phytophthora infestans

Demetrio Marcianò, Stefano Rosa, Elena Marone Fassolo, Chiara Bertaso, Andrea Tagliani, Nina Gauri Capra, Federico Ballabio, Chiara Mizzotti, Giulia Rizzi, Sadia Fida Ullah, Lisa Kappel, Lucia Feni, Luca Tadini, Louise Jane Gourlay, Rosaria Russo, Vincent Bulone, Sabrina Pricl, Sandrine Ongeri, Sara Pellegrino, Carlo Camilloni, Silvia Laura Toffolatti, Vaibhav Srivastava, Paolo Pesaresi, Simona Masiero

doi: 10.1111/jipb.70343

Version of Record online: 16 July 2026

The small cyclic peptide CP32 effectively inhibits Phytophthora infestans, the causal agent of potato and tomato late blight. Combined biochemical and phenotypic analyses demonstrate that CP32 disrupts cell wall biosynthesis, a key process in pathogen infection, resulting in a marked reduction of disease symptoms in plants.

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Fine-tuning fatty acid composition enhances rice resistance to bacterial blight

Rundong Shen, Xinbo Li, Yaqi Zhang, Liying Ding, Yongzhen Pang, Kexuan Tang

doi: 10.1111/jipb.70314

Version of Record online: 16 July 2026

Genome editing to insert an inhibitory element into the 5' untranslated region of the stearoyl-acyl carrier protein desaturase gene OsSSI2 fine-tuned fatty acid composition, creating mutants with enhanced bacterial blight resistance while maintaining normal growth and yield.

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14-3-3 proteins: Central hubs in plant development and stress adaptation

Jiale Yuan, Qizhang Wang, Jing Cao, Furong Wang, Hua Zhou, Jigang Li, Fang Lin

doi: 10.1111/jipb.70350

Version of Record online: 16 July 2026

This review highlights recent advances elucidating the important roles of 14-3-3 proteins in regulating phytohormone networks, biotic and abiotic stress tolerance, growth-defense trade-offs, and evolutionary adaptations. Furthermore, it provides a forward-looking perspective on 14-3-3 biology and the development of climate-resilient smart crops under field-relevant conditions.

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PtoHY5 integrates photoperiodic signals with the ABA pathway to coordinate growth cessation and dormancy in Populus

Hongbin Wei, Junlong Shen, Yongfeng Gao, Yue Xiao, Fan Sun, Miao Fang, Qin Song, Xiang Liu, Yinan Yao, Keming Luo

doi: 10.1111/jipb.70349

Version of Record online: 16 July 2026

In Populus, short days deactivate the growth-promoting protein PtoHY5, turning off a growth accelerator and activating an abscisic acid-driven brake. This directly couples growth cessation with dormancy, underscoring the role of abscisic acid in synchronizing these transitions for winter survival.

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Optimization of a hypercompact Fanzor2 system for improved genome editing performance in plants

Xingyu Cao, Hongfei Liu, Shasha Bai, Rui Wang, Lanqin Xia, Yongwei Sun

doi: 10.1111/jipb.70346

Version of Record online: 14 July 2026

Native Fanzor2 nucleases exhibit weak editing activity in plants. An optimized Fanzor2 system engineered via ωRNA optimization and structure-based protein mutagenesis achieves robust editing at recalcitrant genomic sites and enables cytosine base editing, supporting versatile crop genome modification via transformation or viral delivery.

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LUX ARRHYTHMO transcription factors regulate photoperiod-mediated resistance against common cutworm in soybean

Haiping Du, Aimin Wu, Xiangdong Kong, Chenyang Lin, Ke Zhang, Guyue Zhang, Jianhao Wang, Haiyang Li, Yuhang Zhang, Yutong Liu, Tiantian Bu, Fanjiang Kong, Qing Sang, Yuechen Bai, Hong Li, Zhihui Sun

DOI: 10.1111/jipb.70347

Version of Record online: 14 July 2026

Soybean exhibits stronger resistance to common cutworm under short-day conditions. Mechanistically, short days activate the circadian clock gene LUX ARRHYTHMO, suppressing the expression of JAZ repressors of jasmonate signaling, thereby releasing jasmonate defense signaling and enhancing soybean insect resistance.

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ZmSK4 activates ZmSLAC1 through relief of repression by ZmGCT1 and ZmPP2Cs in ABA signaling

Huiying Li, Zhenkai Feng, Jinkui Cheng, Yu Wang, Junshen Qi, Wen Song, Shuhua Yang, Zhizhong Gong

DOI: 10.1111/jipb.70348

Version of Record online: 14 July 2026

In maize, ZmSK4 is a key kinase that activates the anion channel ZmSLAC1 to close stomata during drought. Under drought stress, abscisic acid signaling releases ZmSK4 from inhibition by ZmGCT1 and ZmPP2Cs, letting it phosphorylate and activate ZmSLAC1 to promote stomatal closure and enhance drought tolerance.

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Volatile organic compounds orchestrating microbiome-mediated crop resilience: Prospects and challenges for sustainable agriculture

Peiguo Yuan, Esau De la Vega-Camarillo, Michael V. Kolomiets, Sanjay Antony-Babu

doi: 10.1111/jipb.70333

Version of Record online: 10 July 2026

Herbivory triggers the production of green leaf volatiles, and dense planting results in induces increased concentration of linalool emission in maize canopies. These volatiles activate plant-soil feedback that enriches beneficial rhizosphere bacteria, enhancing resistance, though sometimes at a growth cost, thereby offering new avenues for sustainable crop improvement.

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A GmOIL2 allele separates fertility and seed traits in soybean

Ying Chen, Jing-Tian Wang, De-Hui Yuan, Yi-Lin Zeng, Xiao-Shuang Ma, Xiu-Ting Liang, Qiu-Yun Jiang, Yi-Yi Xia, Jian-Fang Zuo, Yuan-Ming Zhang

doi: 10.1111/jipb.70345

Version of Record online: 08 July 2026

A CRISPR-derived 36-bp in-frame deletion in GmOIL2 maintains fertility and seed weight while altering seed-related traits. This allele provides a genetic resource for improving soybean quality without affecting seed weight.

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RING E3 ligase SNIPER8 functions redundantly with three close homologs to regulate the turnover of transcriptional co-repressor TPR1

Xueru Liu, Paul Kapos, Zhongshou Wu, Yujun Peng, Meixuezi Tong, Asana Khajavi, Yan Huang, Yuelin Zhang, Xin Li

doi: 10.1111/jipb.70341

Version of Record online: 06 July 2026

The Arabidopsis E3 ligase SNIPER8 negatively regulates immunity by promoting ubiquitination and proteasomal degradation of the transcriptional corepressor TOPLESS-RELATED1, limiting excessive immune responses, maintaining immune homeostasis, and balancing defense activation and normal plant growth.

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Engineering glyphosate-resistant watermelon by prime editing

Shouwei Tian, Yu Lu, Jingchao Chen, Guoyi Gong, Haiying Zhang, Jie Zhang, Changlong Wen, Yong Xu

doi: 10.1111/jipb.70344

Version of Record online: 06 July 2026

Editing the watermelon EPSPS gene using a prime editing platform with visible markers created a non-transgenic glyphosate-resistant line. These robust heterozygous mutants tolerate field-level herbicide doses without growth penalties, serving as ideal parental lines for crop breeding.

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Climate-driven niche filtering limits post-dispersal establishment and genomic introgression in a riverine shrub

Zeng-Yuan Wu, Mark A. Chapman, Richard I. Milne, Jie Liu, Ya-Huang Luo, Peng-Zhen Fan, Guang-Fu Zhu, Jason T. Weir, Richard T. Corlett, Xiao-Gang Fu, Toby P. N. Tsang, Marc W. Cadotte, De-Zhu Li

doi: 10.1111/jipb.70336

Version of Record online: 06 July 2026

Integrated biogeographic analysis and macroecological insights reveal that habitat differences drive genetic differentiation Debregeasia orientalis C. J. Chen, a dominant riparian shrub distributed across multiple biodiversity hotspots, and different lineages vary greatly in adaptability to future climate.

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Duet between sugars and hormones: The molecular dialogue fine-tuning hypoxia acclimation in plants

Muhammad Ateeq, Muhammad Atiq Ashraf, Muhammad Asim, Xue Huang, Kaijie Zhu, Sergey Shabala, Junwei Liu

DOI: 10.1111/jipb.70339

Version of Record online: 06 July 2026

Sugar-hormone crosstalk enables plants to maintain metabolism and adjust development under low-oxygen conditions. This review highlights how sugar metabolism and phytohormone signaling coordinate adaptive responses to hypoxia, identifies key knowledge gaps, and outlines future research directions for developing crops resilient to submergence and waterlogging stress.

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ABA orchestrates the expression of SWEET16 for sugar accumulation via phosphorylation and transcriptional mechanisms in citrus

Xiawan Zhai, Changle Cai, Chao He, Zuolin Mao, Ziyan Liu, Junhong Zhang, Ji-Hong Liu, Chunlong Li

DOI: 10.1111/jipb.70340

Version of Record online: 03 July 2026

Abscisic acid (ABA) signaling enhances sugar accumulation in citrus by a brake-accelerator mechanism: ABA regulates phosphorylation and stability of the transcription factor CsMYB35 to dynamically relieve CsMYB35-mediated repression of the sugar transporter gene CsSWEET16 while also activating the transcription factors CsABF3 and CsABI5 to upregulate CsSWEET16, thereby improving sugar content.

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Cross-kingdom RNA decoy redefines fungal virulence strategies

Xiong Zhang, Rong Zuo, Lixia Gao, Meixiang Zhang

doi: 10.1111/jipb.70342

Version of Record online: 03 July 2026

This commentary highlights a new study revealing a fungal RNA decoy strategy that interferes with plant microRNA-mediated immune regulation. By blocking key microRNA activity, fungal RNAs reprogram host gene expression and weaken immune responses, thereby enhancing pathogen virulence and disease susceptibility in rice.

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The ZFP36/ZFP252–OsDOG1L1–OsPP2Cs module regulates seed germination in rice

Chuyan Chen, Kunming Zhang, Jun Miao, Xianhui Yao, Jiajia Yu, Xiangbo Li, Xianfeng Li, Liang Chen, Gulinaer Bahetibieke, Lei Ren, Zhiyun Gong, Chen Chen, Qianfeng Li, Zefeng Yang, Tao Zhang, Guohua Liang, Yong Zhou

DOI: 10.1111/jipb.70335

Version of Record online: 29 June 2026

In rice, the zinc finger transcription factors ZFP36 and ZFP252 directly repress the DELAY OF GERMINATION (DOG) gene OsDOG1L1 by binding its promoter. OsDOG1L1 interacts with two protein phosphatase 2Cs, OsPP2C09 and OsPP2C30, to inhibit their phosphatase activity, strengthening abscisic acid signaling and restraining seed germination.

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Engineered diazotrophs with host-inducible nitrogen supply systems: Transforming rice farming through innovative nitrogen biofertilizers

Ahana Sengupta, Rudra Narayan Sahoo, Senjuti Sinharoy

DOI: 10.1111/jipb.70320

Version of Record online: 29 June 2026

This review offers a comprehensive overview and a strategic roadmap for engineering customized nitrogen-fixing microbes. By integrating these bacteria into synthetic microbial communities, future research can develop targeted, high-efficiency nitrogen exporters tailored for rice to drive sustainable agriculture and potentially reduce N-fertilizer use.

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Engineered nanoparticles at the redox interface: Rewiring ROS signaling and stress responses in plants

Mahdi Jamei, Rashid Jamei

DOI: 10.1111/jipb.70316

Version of Record online: 29 June 2026

Engineered nanoparticles reprogram plant redox networks by reshaping reactive oxygen and nitrogen signaling, antioxidant systems, organellar function, and microbiome interactions. This review integrates mechanistic, spatial, and dose-dependent perspectives to distinguish adaptive from toxic responses, providing a safe-by-design conceptual framework for translating nanotechnology into resilient and sustainable crop production systems worldwide.

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Plant biology for a changing world: Expert reviews on crop resilience, breeding, and emerging technologies

Jie Shen, Zhizhong Gong

doi: 10.1111/jipb.70338

Version of Record online: 29 June 2026

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Enhanced Cas12i3 system enables precise OsAUX3 editing for rice grain improvement

Rui Zhang, Xu Tang, Xinruolan Yang, Yong Zhang

doi: 10.1111/jipb.70337

Version of Record online: 29 June 2026

An optimized Cas12i3 genome-editing system enables highly efficient and predictable editing of regulatory sequences in rice. Precise promoter engineering fine-tunes gene expression, improves grain size, and enhances production potential, demonstrating a powerful new approach for crop improvement through targeted regulation rather than gene disruption.

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Orchid genome evolution and trait innovation

Meng-Yao Zeng, Cheng-Yuan Zhou, Linying Wang, Jie Gao, Weilun Yin, Dong-Hui Peng, Siren Lan, Feng-Xi Yang, Zhong-Jian Liu

doi: 10.1111/jipb.70315

Version of Record online: 25 June 2026

Orchids became one of the world's most diverse plant groups through genome-driven innovations, unique relationships with fungi and pollinators, and remarkable adaptability. This review explains the origins of orchids and the evolution of their distinctive life forms, flowers, and ecological strategies and highlights promising directions for future research.

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Decoding heat through membrane nanoclusters in plants

Jiaxuan Peng, Xiaofeng Fang

doi: 10.1111/jipb.70330

Version of Record online: 23 June 2026

This commentary interprets recent findings on how plants decode heat at the plasma membrane. By discussing FERONIA-mediated membrane nanoclusters, it highlights how receptor activation, lipid organization, and signaling compartmentalization work together to distinguish adaptive warming from damaging heat, offering new perspectives on plant thermosensing and crop heat resilience.

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SmABCG11 mediates hydroxy fatty acid transport to regulate male fertility

Yanjie Zhang, Jiansen Fang, Siyue Ruan, Yong Wang, Jun Jiang, Qiu Yang, Alisdair R. Fernie, Yan Li

doi: 10.1111/jipb.70327

Version of Record online: 23 June 2026

The tonoplast-localized ABCG transporter SmABCG11 directly transports long-chain hydroxy fatty acids, the core structural precursors of sporopollenin, to regulate pollen wall development and male fertility in eggplant.

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Smart double-screening system of propagating male-sterile lines for maize hybrid seed production

Ruidan Liu, Shengxi Hou, Hui Guo, Yang Cui, Weibin Song, Jie Yang, Hainan Zhao, Qiujie Liu, Jian Chen, Jinsheng Lai, Haiming Zhao

doi: 10.1111/jipb.70331

Version of Record online: 23 June 2026

The Seed and Seedling Marker Method double-screening system for maize hybrid seed production integrates Ms45-mediated fertility restoration, Mn1/Sh1-RNAi-based seed selection, and Lc-based seedling selection. It thus enables efficient, high-purity propagation of male-sterile lines by combining fertility maintenance with sequential visual selection at the seed and seedling stages.

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Breaking the growth–defense seesaw: An NLR–TF module under asymmetric selection

Yonglin Wu, Zian Ye, Mingjun Gao

doi: 10.1111/jipb.70332

Version of Record online: 23 June 2026

This Commentary highlights a study revealing that adaptation to cold climates indirectly drove the loss of bacterial blight resistance in japonica rice. Rebuilding the lost immune module restores strong disease resistance without yield penalty, opening new opportunities for crop breeding.

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Gravity‐induced PIN3b polarization redirects auxin fluxes and transcriptional reprogramming to drive tension wood formation in Populus

Miao Zhang, Ning Zhou, Xiao Li, Siwei Lv, Zijian Gong, Changzheng Xu, Keming Luo, Mengzhu Lu, Jinshan Gui

DOI: 10.1111/jipb.70325

Version of Record online: 21 June 2026

In Populus, gravity, not mechanical strain, initiates tension wood formation by redirecting the growth hormone auxin, revealing how trees sense orientation, reshape their structure, and adapt to their environment.

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Strigolactone‐mediated architecture regulation and stress resilience: Insights and innovations for crop breeding

Qingliang Hu, Jiayang Li, Bing Wang

doi: 10.1111/jipb.70310

Version of Record online: 21 June 2026

This review summarizes the discovery, biosynthesis, and transport of strigolactone, and the D14-D3/MAX2-D53/SMXLs signaling module. It highlights diverse roles of strigolactone in plant architecture, stress responses, and crop breeding, including species-specific functions, hormonal crosstalk, and agricultural applications. These insights support rational design of crops with improved growth, resilience, and yield.

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The multifaceted regulatory network of microRNA396: Orchestrating plant plasticity through coordinating development and various stresses

Hang Yang, Ying Yan, Lixia Zhang, Junhua Ye, Kai Wang, Zejun Hu, Lingjuan Xie, Liming Cao, Shujun Wu, Zhenying Shi

doi: 10.1111/jipb.70324

Version of Record online: 21 June 2026

This review examines the character and function of the microRNA miR396, which helps plants balance growth, reproduction, regeneration, and survival under various stresses, highlighting recent progress and evidence that this pathway shapes crop yield, pest and disease resistance, and tissue regeneration, making it a promising target for precision crop improvement.

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LlSAPK2 confers thermotolerance in lily by phosphorylating and stabilizing LlbZIP46

Qianqian Fang, Dandan Zhang, Zhanli Zu, Jun Xiang, Liping Ding, Nianjun Teng, Ze Wu

doi: 10.1111/jipb.70326

Version of Record online: 19 June 2026

The serine/threonine protein kinase LlSAPK2 enhances thermotolerance in lily (Lilium longiflorum) by phosphorylating and stabilizing the transcription factor LlbZIP46, which activates heat shock factor genes, thereby reducing heat-induced cellular damage.

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Natural variation in the promoter of OsPDX1.2 enhances vitamin B6 accumulation and cold tolerance in rice

Bi Wang, Qiu Yi Wang, Wen Jie Shi, Rong Hui Li, Xu Dong Zhang, Li Ping Wang, Shi Jia Xia, Kai Xi Chen, Jun Jie Zhou, Yang Yang Sun, Jing He, Alisdair R. Fernie, Ying Chun Han, Jun Zhou Li, Yu Heng Shi, Xian Qing Liu, Yuan Yuan Zhang, Jie Luo, Cheng Jin

doi: 10.1111/jipb.70322

Version of Record online: 15 June 2026

Allelic variation in the promoter of the pyridoxal phosphate synthase OsPDX1.2 caused variation in the ACE-box cis-elements, resulting in differing OsPDX1.2 expression due to differences in binding affinity between the OsbZIP18 transcriptipn factor and the ACE-box, contributing to variation in vitamin B6 levels and cold tolerance among rice varieties.

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Sugarcane breeding array 1.0: A high‐density SNP chip for genomic studies and molecular breeding

Meiyan Chen, Chaohua Xu, Ni Wei, Bowen Kuang, Peng Liu, Jinkang Song, Bo Yu, Fengzhen Wu, Xin Lu, Xiping Yang

doi: 10.1111/jipb.70319

Version of Record online: 15 June 2026

Sugarcane Breeding Array 1.0, a high-density single-nucleotide polymorphism array, is based on deep whole-genome resequencing of diverse sugarcane accessions. Validation demonstrated its robust performance and cost-effectiveness in population structure analysis, genome-wide association studies, and molecular breeding applications.

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Thermogenesis‐derived spatiotemporal microclimates guide pollinator movement to ensure pollination

Yuanjun Yu, Yan Luo, Wufan Zhang, Xiang Ding, Xiqiang Song, Yibo Luo

doi: 10.1111/jipb.70318

Version of Record online: 15 June 2026

Alocasia odora's microclimatic heterogeneity guides Colocasiomyia fly movement within its inflorescence. During the female stage, midday heat in the upper spadix pushes flies down to the cooler female zone. During the male stage, nocturnal warmth in the upper part pulls flies upward and spathe constriction closes the lower female chamber.

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Genome editing precisely boosts salt‐tolerant japonica rice yield

Mengmeng Zhou, Qihao Sun, Jian Sun, Jiaoyan An, Yanpeng Lv, Cui Li, Yunlong Lu, Jiyue Qiao, Xiaoming Zheng, Qian Qian

doi: 10.1111/jipb.70313

Version of Record online: 15 June 2026

Gene editing of three key genes, G PROTEIN GAMMA SUBUNIT, CYTOKININ OXIDASE, AND IDEAL PLANT ARCHITECTURE 1, improved the salt-tolerant japonica rice variety Lansheng increased yield while maintaining its original salt tolerance and quality.

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