J Integr Plant Biol. ›› 2018, Vol. 60 ›› Issue (8): 670-690.DOI: 10.1111/jipb.12656

• Metabolism and Biochemistry • Previous Articles     Next Articles

Characterization of maize leaf pyruvate orthophosphate dikinase using high throughput sequencing

Yuling Zhang1, Rita Giuliani2, Youjun Zhang3, Yang Zhang4, Wagner Luiz Araujo3, Baichen Wang5, Peng Liu6, Qi Sun7, Asaph Cousins2, Gerald Edwards2, Alisdair Fernie3, Thomas P. Brutnell8 and Pinghua Li1*   

  1. 1State Key Laboratory of Crop Biology, College of Agronomic Sciences, Shandong Agricultural University, Tai’an 271018, China
    2School of Biological Sciences, Molecular Plant Sciences, Washington State University, Pullman, WA 99164-4236, USA
    3Max-Planck-Insitut für Molekulare Pflanzenphysiologie, Am Mühlenberg 1, Potsdam-Golm D-14476, Germany
    4Department of Agronomy and Horticulture, University of Nebraska-Lincoln, Nebraska, USA
    5Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, No.20 Nanxincun, Xiangshan, Beijing 100093, China
    6Department of Statistics, Iowa State University, Ames, Iowa 50011, USA
    7Computational Biology Service Unit, Life Sciences Core Laboratories Center, Cornell University, Ithaca, New York 14850, USA
    8Donald Danforth Plant Science Center, St. Louis, Missouri 63132, USA

    *Correspondence:

    Email: Pinghua Li (pinghuali@sdau.edu.cn)
  • Received:2018-03-18 Accepted:2018-04-12 Online:2018-04-17 Published:2018-08-01

Abstract: In C4 photosynthesis, pyruvate orthophosphate dikinase (PPDK) catalyzes the regeneration of phosphoenolpyruvate in the carbon shuttle pathway. Although the biochemical function of PPDK in maize is well characterized, a genetic analysis of PPDK has not been reported. In this study, we use the maize transposable elements Mutator and Ds to generate multiple mutant alleles of PPDK. Loss‐of‐function mutants are seedling lethal, even when plants were grown under 2% CO2, and they show very low capacity for CO2 assimilation, indicating C4 photosynthesis is essential in maize. Using RNA‐seq and GC‐MS technologies, we examined the transcriptional and metabolic responses to a deficiency in PPDK activity. These results indicate loss of PPDK results in downregulation of gene expression of enzymes of the C4 cycle, the Calvin cycle, and components of photochemistry. Furthermore, the loss of PPDK did not change Kranz anatomy, indicating that this metabolic defect in the C4 cycle did not impinge on the morphological differentiation of C4 characters. However, sugar metabolism and nitrogen utilization were altered in the mutants. An interaction between light intensity and genotype was also detected from transcriptome profiling, suggesting altered transcriptional and metabolic responses to environmental and endogenous signals in the PPDK mutants.

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