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Max Planck Institute of Molecular Plant Physiology
14476 Potsdam-Golm, Germany
E-mail: fernie@mpimp-golm.mpg.de
https://www.mpimp-golm.mpg.de/5224/Alisdair_Fernie
Area of expertise: metabolism, metabolomics, crop genomics
Selected Publications:
Li, J., Martin, C., and Fernie, A. R. (2024). Biofortification´s contribution to mitigating micronutrient deficiencies. Nat. Food 5: 19–27.
Sun, Y., and Fernie, A. R. (2024). Plant secondary metabolism in a fluctuating world: climate change perspectives. Trends Plant Sci. 29: 560–571.
Zhang, Y., Wiese, L., Fang, H., Alseekh, S., Perez de Souza, L., Scossa, F., Molloy, J., Christmann, M., and Fernie, A. R. (2023). Synthetic biology identifies the minimal gene set required for paclitaxel biosynthesis in a plant chassis. Mol. Plant 16: 1951–1961.
Rosado-Souza, L., Yokoyama, R., Sonnewald, U., and Fernie, A. R. (2023). Understanding source-sink interactions: Progress in model plants and translational research to crops. Mol. Plant 16: 96–121.
Zhu, F., Alseekh, S., Koper, K., Tong, H., Nikoloski, Z., Naake, T., Liu, H., Yan, J., Brotman, Y., Wen, W., Maeda, H., Cheng, Y., and Fernie, A. R. (2022). Genome-wide association of the metabolic shifts underpinning dark-induced senescence in Arabidopsis. Plant Cell 34: 557–578.
Alseekh, S., Aharoni, A., Brotman, Y., Contrepois, K., D'Auria, J., Ewald, J., C Ewald, J., Fraser, P. D., Giavalisco, P., Hall, R. D., Heinemann, M., Link, H., Luo, J., Neumann, S., Nielsen, J., Perez de Souza, L., Saito, K., Sauer, U., Schroeder, F. C., Schuster, S., Siuzdak, G., Skirycz, A., Sumner, L. W., Snyder, M. P., Tang, H., Tohge, T., Wang, Y., Wen, W., Wu, S., Xu, G., Zamboni, N., and Fernie, A. R. (2021). Mass spectrometry-based metabolomics: A guide for annotation, quantification and best reporting practices. Nat. Methods 8: 747–756.
Bolger, A., Scossa, F., Bolger, M. E., Lanz, C., Maumus, F., Tohge, T., Quesneville, H., Alseekh, S., Sørensen, I., Lichtenstein, G., Fich, E. A., Conte, M., Keller, H., Schneeberger, K., Schwacke, R., Ofner, I., Vrebalov, J., Xu, Y., Osorio, S., Aflitos, S. A., Schijlen, E., Jiménez-Goméz, J. M., Ryngajllo, M., Kimura, S., Kumar, R., Koenig, D., Headland, L. R., Maloof, J. N., Sinha, N., van Ham, R. C., Lankhorst, R. K., Mao, L., Vogel, A., Arsova, B., Panstruga, R., Fei, Z., Rose, J. K., Zamir, D., Carrari, F., Giovannoni, J. J., Weigel, D., Usadel, B., and Fernie, A. R. (2014). The genome of the stress-tolerant wild tomato species Solanum pennellii. Nat. Genet. 46: 1034–1038.
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