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Key Laboratory of Molecular Epigenetics of the Ministry of Education, Northeast Normal University, Changchun, Jilin 130024, China
Tel: 0431-85099367
E-mail: gongl100@nenu.edu.cn
https://js.nenu.edu.cn/teacher/index_fix.php
Area of expertise: Plant genomics, Epigenetics, Evolutionary biology
Selected Publications:
Xun, H.W., Lv, R.L., Yu, Y., Yao, J.Y., Wang, R.S., Sha, Y., Wang, H., Zhang, D.S., Xu, C.M., Wang, T.Y., Zhang, Z.B., Liu, B., Gong, L. (2024). Evolutionary genomics of two diploid goat grass species belonging to the section Sitopsis of Aegilops, Aegilops longissima, and Aegilops sharonensis. Plant J. 119: 1543–1557.
Zhang, Z.B., Zhao, J., Li, J.Z., Yao, J.Y., Wang, B., Ma, Y.Q., Li, N., Wang, H.Y., Wang, T.Y., Liu, B., and Gong, L. (2024). Evolutionary trajectory of organelle-derived nuclear DNAs in the Triticum/Aegilops complex species. Plant Physiol. 194: 918–935.
Zhang, K.R., Zhao, X.R., Zhao, Y., Zhang, Z.B., Liu, Z.J., Liu, Z.Y., Yu, Y.N., Li, J.Z., Ma, Y.Q., Dong, Y.F., Pang, X., Jin, X., Li, N., Liu, B., Wendel, J.F., Zhai, J.X., Long, Y.P., Wang, T.Y., and Gong, L. (2023). Cell type-specific cytonuclear coevolution in three allopolyploid plant species. Proc. Natl. Acad. Sci. U. S. A. 120: e2310881120.
Li, X.C., Wang, J.B., Yu, Y.N., Li, G., Wang, J.P., Li, C.P., Zeng, Z.X., Li, N., Zhang, Z.B., Dong, Q.L., Yu, Y.Y., Wang, X.F., Wang, T.Y., Grover, C.E., Wang, B., Liu, B., Wendel, J.F., and Gong, L. (2023). Genomic rearrangements and evolutionary changes in 3D chromatin topologies in the cotton tribe (Gossypieae). BMC Biol. 21: 56.
Wang, J.B., Li, X.C., Dong, Q.L., Li, C.P., Li, J.Z., Li, N., Ding, B.X., Wang, X.F., Yu, Y.N., Wang, T.Y., Zhang, Z.B., Yu, Y.Y., Lang, M., Zeng, Z.X., Liu, B., and Gong, L. (2022). Chromatin architectural alterations due to null mutation of a major CG methylase in rice. J. Integr. Plant Biol. 64: 2396–2410.
Zhang, K.R., Li, J.Z., Li, G., Zhao, Y., Dong, Y.F., Zhang, Y., Sun, W.Q., Wang, J.S., Yao, J.Y., Ma, Y.Q., Wang, H.Y., Zhang, Z.B., Wang, T.Y., Xie, K., Wendel, J.F., Liu, B., and Gong, L. (2022). Compensatory Genetic and Transcriptional Cytonuclear Coordination in Allopolyploid Lager Yeast (Saccharomyces pastorianus). Mol. Biol. Evol. 39: msac228.
Wang, B., Lv, R.L., Zhang, Z.B., Yang, C.W., Xun, H.W., Liu, B., and Gong, L. (2022). Homoeologous exchange enables rapid evolution of tolerance to salinity and hyper-osmotic stresses in a synthetic allotetraploid wheat. J. Exp. Bot. 73: 7488–7502.
Li, C.P., Ding, B.X., Ma, X.T., Yang, X., Wang, H.Y., Dong, Y.F., Zhang, Z.B., Wang, J.B., Li, X.C., Yu, Y.N., Yu, Y.Y., Liu, B., Wendel, J.F., Li, Y.D., Wang, T.Y., and Gong, L. (2022). A temporal gradient of cytonuclear coordination of chaperonins and chaperones during RuBisCo biogenesis in allopolyploid plants. Proc. Natl. Acad. Sci. U. S. A. 119: e2200106119.
Zhang, Z.B., Xun, H.W., Lv, R.L., Gou, X.W., Ma, X.T., Li, J.Z., Zhao, J., Li, N., Gong, L., and Liu, B. (2022). Effects of homoeologous exchange on gene expression and alternative splicing in a newly formed allotetraploid wheat. Plant J. 111: 1267–1282.
Ma, X.T., Zhang, Z.B., Li, G., Gou, X.W., Bian, Y., Zhao, Y., Wang, B., Lang, M., Wang, T.Y., Xie, K., Liu, X.M., Liu, B., and Gong, L. (2022). Spatial and Temporal Transcriptomic Heredity and Asymmetry in an Artificially Constructed Allotetraploid Wheat (AADD). Front. Plant Sci. 13: 887133.
Wu, Y., Lin, F., Zhou, Y., Wang, J., Sun, S., Wang, B., Zhang, Z.B., Li, G., Lin, X.Y., Wang, X.T., Sun, Y., Dong, Q.L., Xu, C.M., Gong, L., Wendel, J.F., Zhang, Z.W., and Liu, B. (2021). Genomic mosaicism due to homoeologous exchange generates extensive phenotypic diversity in nascent allopolyploids. Natl. Sci. Rev. 8: nwaa277.
Li, C.P., Wang, X.F., Xiao, Y.X., Sun, X.H., Wang, J.B., Yang, X., Sun, Y.C., Sha, Y., Lv, R.L., Yu, Y.N., Ding, B.X., Zhang, Z.B., Li, N., Wang, T.Y., Wendel, J.F., Liu, B., and Gong, L. (2020). Coevolution in Hybrid Genomes: Nuclear-Encoded Rubisco Small Subunits and Their Plastid-Targeting Translocons Accompanying Sequential Allopolyploidy Events in Triticum. Mol. Biol. Evol. 37: 3409–3422.
Wu, X.Y., Ding, B.X., Zhang, B.Q., Feng, J.J., Wang, Y.B., Ning, C., Wu, H.D., Zhang, F., Zhang, Q., Li, N., Zhang, Z.B., Sun, X.H., Zhang, Q.C., Li, W.Y., Liu, B., Cui, Y.Q., and Gong, L. (2019). Phylogenetic and population structural inference from genomic ancestry maintained in present-day common wheat Chinese landraces. Plant J. 99: 201–215.
Zhang, Z.B., Fu, T.S., Liu, Z.J., Wang, X.T., Xun, H.W., Li, G., Ding, B.X., Dong, Y.Z., Lin, X.Y., Sanguinet, K,A., Liu, B., Wu, Y., and Gong, L. (2019). Extensive changes in gene expression and alternative splicing due to homoeologous exchange in rice segmental allopolyploids. Theor. Appl. Genet. 132: 2295–2308.
Li, N., Xu, C.M., Zhang, A., Lv, R.L., Meng, X.C., Lin, X.Y., Gong, L., Wendel, J.F., and Liu, B. (2019). DNA methylation repatterning accompanying hybridization, whole genome doubling and homoeolog exchange in nascent segmental rice allotetraploids. New Phytol. 223: 979–992.
Li, C.P., Sun, X.H., Conover, J.L., Zhang, Z.B., Wang, J.B., Wang, X.F., Deng, X., Wang, H.Y., Liu, B., Wendel, J.F., and Gong, L. (2019). Cytonuclear coevolution following homoploid hybrid speciation in Aegilops tauschii. Mol. Biol. Evol. 36: 341–349.
Dong, Q.L., Li, N., Li, X.C., Yuan, Z., Xie, D.J., Wang, X.F., Li, J.N., Yu, Y.N., Wang, J.B., Ding, B.X., Zhang, Z.B., Li, C.P., Bian, Y., Zhang, A., Wu, Y., Liu, B., and Gong, L. (2018). Genome-wide Hi-C analysis reveals extensive hierarchical chromatin interactions in rice. Plant J. 94: 1141–1156.
Sun, Y., Wu, Y., Yang, C.W., Sun, S., Lin, X.Y., Liu, L.X., Xu, C.M., Wendel, J.F., Gong, L., and Liu, B. (2017). Segmental allotetraploidy generates extensive homoeologous expression rewiring and phenotypic diversity at the population level in rice. Mol. Ecol. 26: 5451–5466.
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