J Integr Plant Biol.

• Review Article • Previous Articles    

Genome editing of medicinal plants: Advances, challenges, and prospects

Wenhua Chen1,2, Yi Shi2, Zongyou Lv2,3* and Wansheng Chen1,2*   

  1. 1. Department of Pharmacy, Changzheng Hospital, Second Military Medical University, Shanghai 200003, China
    2. Research and Development Center of Chinese Medicine Resources and Biotechnology, Shanghai University of Traditional Chinese Medicine, Shanghai 201203, China
    3. State Key Laboratory for Quality Ensurance and Sustainable Use of Dao‐di Herbs, Beijing 100700, China
    *Correspondences: Zongyou Lv (zongyoulv@163.com); Wansheng Chen (chenwansheng@shutcm.edu.cn, Dr. Chen is fully responsible for the distribution of all materialsassociated with this article)
  • Received:2025-09-08 Accepted:2025-11-17 Online:2026-01-12
  • Supported by:
    This study was supported by the National Natural Science Foundation of China (32070332, U23A20512, 81874335), the National Key Research and Development Program of China (2023YFC3504800, 2022YFC3501700), the China Postdoctoral Science Foundation (2024M752089), the Postdoctoral Fellowship Program (Grade C) of the China Postdoctoral Science Foundation (GZC20231698), the Shanghai Science and Technology Committee Rising‐Star Program (24YF2740800), the Program of Shanghai Academic/Technology Research Leader (23XD1423500), and the State Key Laboratory of Southwestern Chinese Medicine (SKLTCM202310), Key project at the central government level: The ability establishment of sustainable use for valuable Chinese medicine resources (2060302).

Abstract: Medicinal plants produce important pharmaceuticals, but these compounds are often present at low levels or only in specific tissues; in addition, many medicinal plants produce small amounts of biomass and are difficult to cultivate. Genome editing for agronomic traits and metabolic engineering holds promise for improving pharmaceutical production, and genome-editing applications in medicinal plants have expanded as genome-editing techniques have advanced. For example, genome editing has been used to regulate the production of phenolic acids and tanshinone metabolites of Salvia miltiorrhiza in medicinal plants. In this review, we synthesize the current knowledge on the development and applications of gene-editing tools in medicinal plants. Furthermore, we summarize the limitations of genome editing in these species and propose solutions for addressing these challenges to fully harness this technology for improving these important plants. We focus on novel technologies to enhance the regeneration rates of transgenic plants, artificial intelligence-assisted multiomics approaches for predicting editing efficiency, key components that optimize genome-editing efficacy, and the development of innovative gene-editing systems. Finally, we offer perspectives on advancing metabolic engineering strategies for medicinal plants.

Key words: genome editing, medicinal plants, metabolic engineering, regeneration rate, regulate

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