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RING E3 ligase SNIPER8 functions redundantly with three close homologs to regulate the turnover of transcriptional co-repressor TPR1

Xueru Liu1,2†, Paul Kapos1,2†, Zhongshou Wu1,2, Yujun Peng2, Meixuezi Tong1,2, Asana Khajavi1, Yan Huang3, Yuelin Zhang2,4 and Xin Li1,2*   

  1. 1. Michael Smith Laboratories, University of British Columbia, Vancouver V6T 1Z4, Canada
    2. Department of Botany, University of British Columbia, Vancouver V6T 1Z4, Canada
    3. College of Life Sciences, Sichuan Agricultural University, Ya'an 625014, China
    4. Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610065, China
    These authors contributed equally to this work.
    *Correspondence: Xin Li (xinli@msl.ubc.ca)
  • Received:2025-11-13 Accepted:2026-06-16 Online:2026-07-06
  • Supported by:
    We thank Josh Li for his assistance with the confocal microscopy imaging. Paul Kapos was partly supported by the Natural Sciences and Engineering Research Council of Canada (NSERC) and the UBC Four-Year Fellowships (4YF). Xueru Liu and Yujun Peng are partially supported by scholarships from the China Scholarship Council (CSC) and 4YF, respectively. Financial support for this research was partially provided by NSERC-Discovery, NSERC-CREATE-PRoTECT, and CFI-JELF grants. The Arabidopsis Biological Resource Center (ABRC) is thanked for providing seeds of T-DNA mutants.

Abstract: Ubiquitination is a common protein modification, mostly targeting protein substrates for degradation. As E3 ligases serve critical roles in substrate recognition, their biological functions are of special interest. Through a targeted reverse genetic screen, we discovered a novel E3, SNIPER8 (snc1-influencing plant E3 ligase reverse genetic, 8), that negatively regulates immunity in Arabidopsis. Overexpression of SNIPER8 suppressed the phenotypes of the autoimmune mutant snc1, which carries a gain-of-function mutation in a TIR-type NLR (Toll/ Interleukin-1 Receptor-like nucleotide-binding leucine-rich repeat receptor). Conversely, knocking out sniper8 enhanced the dwarfism of snc1. SNIPER8 and its three paralogs function redundantly, and knocking out all four genes in wild-type background yielded strong autoimmunity. To search for the substrates of SNIPER8, a suppressor screen with the sniper8 quadruple mutant was carried out, which yielded many loss-of-function alleles of SNC1. As the transcriptional corepressor TPR1 (Topless-related protein 1) was known to be required for SNC1- mediated immunity, its relationship with SNIPER8 was examined. SNIPER8 was found to directly interact with TPR1 and negatively regulate its protein levels. In addition, SNIPER8 overexpression can suppress TPR1-mediated autoimmunity, whereas the autoimmunity of sniper8 quadruple mutant fully depends on both the SNC1 locus and three redundant TPL/TPR genes. Taken together, SNIPER8 is a negative regulatory E3 ligase in plant immunity that promotes TPR1 turnover. This regulation is essential for maintaining immune homeostasis and preventing autoimmune activation.

Key words: E3 ligase, plant immunity, snc1-influencing plant E3 ligase reverse genetic (SNIPER8), suppressor of npr1-1, constitutive 1 (SNC1), Topless-related protein 1 (TPR1), ubiquitination

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