J Integr Plant Biol.

• News and Views •    

Breeding 5.0: Artificial intelligence (AI)-decoded germplasm for accelerated crop innovation

Jiayi Fu1,2,3, Shouzhi Zheng1,2,3, Longjiang Fan1,4, Xiaoming Zheng2,3,5*, Qian Qian1,2,3*   

  1. 1. Yazhouwan National Laboratory, Sanya 572024, China

    2. State Key Laboratory of Crop Gene Resources and Breeding/National Key Facility for Crop Gene Resources and Genetic Improvement, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China

    3. National Nanfan Research Institute of Chinese Academy of Agricultural Sciences, Sanya 572024, China

    4. Institute of Crop Science & Institute of Bioinformatics, Zhejiang University, Hangzhou 310058, China

    5. International Rice Research Institute, Metro Manila 1301, Philippines

    *Correspondences: Xiaoming Zheng (zhengxiaoming@caas.cn); Qian Qian (qianqian188@hotmail.com, Dr. Qian is fully responsible for the distribution of all materials associated with this article)

  • Received:2024-12-05 Accepted:2025-07-03 Online:2025-08-07
  • Supported by:
    This work was supported by the Project of Hainan Province Science and Technology Special Fund (ZDYF2022XDNY260, ZDYF2024KJTPY001), the Project of Sanya Yazhou Bay Science and Technology City (SCKJ‐JYRC‐2023‐47 and SKJC‐2023‐02‐001), the Nanfan Special Project, CAAS (YBXM2503, YBXM2556, YBXM2501), the National Key Research and Development Program of China (2021YFD1200101), the National Natural Science Foundation of China (32261143465, 32350710198), the Project of Hainan Province Science and Technology Innovation (KJRC2023A01), and the Hainan Province International Scienti?c and Technological Cooperation Talent and Exchange Project (Foreign Expert Program) Plan (G20241024007E).

Abstract: Crop breeding technologies are vital for global food security. While traditional methods have improved yield, stress tolerance, and nutrition, rising challenges such as climate instability, land loss, and pest pressure now demand new solutions. This study introduces the Breeding 5.0 framework, driven by artificial intelligence (AI) and robotics, marking a shift from empirical selection to intelligent systems.Central to this transformation is AI's emerging ability to deeply “understand germplasm,” not merely by identifying genetic markers but also by decoding its architecture, plasticity, regulatory logic, and environmental interactions. This germplasm intelligence enables predictive trait modeling, optimized parental design, and targeted selection. We define four technical paradigms enabling this shift: (i) Multi-modal data integration to bridge genotype and phenotype; (ii) Omni‐simulated environments for virtual performance testing; (iii) Peopleless data capture for scalable precision; and (iv) Expert,explainable AI for biologically grounded decisions.Together, these technologies algorithmically convert germplasm into actionable breeding insights,accelerating the full cycle from ideal plant type design to elite line development. We further propose the “breeding flywheel,” a self‐reinforcing system that continuously amplifies phenotypic gains and refines breeding strategies, thereby enabling faster and smarter crop improvement to ensure a sustainable food future

Key words: artificial intelligence (AI), breeding, explainable AI, germplasm resources, robotics

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