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A robust biotechnology induces artificial genomic duplication via transient RNAi-mediated suppression of OSD1 in rice

Zijun Lu1, 2, 3†*, Lianjun Zhu1, 2, 3†, Guobin Liang1, 2, 3, Rou Chen1, 2, 3, Yu Huang1, 2, 3, Jia Yang1, 2, 3, Liang Fu1, 2, 3, Xiangxing Zhao1, 2, 3, Runze Wu1, 2, 3 and Xiangdong Liu1, 2, 3*   

  1. 1. Guangdong Laboratory for Lingnan Modern Agriculture, South China Agricultural University, Guangzhou, 510642 China;
    2. Guangdong Provincial Key Laboratory of Plant Molecular Breeding, College of Agriculture, South China Agricultural University, Guangzhou, 510642 China;
    3. Key Laboratory for Enhancing Resource Use Efficiency of Crops in South China, Ministry of Agriculture and Rural Affairs, Guangzhou, 510642 China
    †These authors contributed equally to this work.
    *Correspondences: Xiangdong Liu (xdliu@scau.edu.cn, Dr. Liu is fully responsible for the distribution of all materials associated with this article); Zijun Lu (luzj@scau.edu.cn)
  • Received:2026-01-25 Revised:2026-08-27 Accepted:2026-08-28 Online:2026-09-16
  • Supported by:
    This work was supported by National Key R&D Program of China (2023YFD1200802), the National Natural Science Foundation of China (32572292), the Laboratory of Lingnan Modern Agriculture Project (NT2021001), the Base Bank of Lingnan Rice Germplasm Resources Project (2024B1212060009), the China Postdoctoral Science Foundation under Grant Number 2025M774004.

Abstract: Ploidy manipulation is a crucial strategy for generating germplasm in crop breeding. However, artificial genomic duplication, often induced by colchicine treatment, is associated with toxicity and unpredictability. Although mutations in OSD1 have shown promise for inducing genomic duplication, the instability of ploidy across generations limits their practical application. In this study, we developed a Plant Polyploidization via Gene Interference (PPGI) system that utilizes transient RNAi-mediated suppression of OSD1 to efficiently induce artificial genomic duplication, demonstrating obvious potential for producing autotetraploids. We first validated this system by successfully generating PPGI-induced autotetraploid plants from the Taichung65 cultivar. These PPGI-induced plants exhibited notable differences from Taichung65 but resembled the existing Taichung65-4x line obtained through colchicine treatment. Haplotype analysis indicated that the OSD1 RNAi fragment is conserved across 2,908 rice cultivars. Consequently, we employed the same PPGI vector to develop autotetraploid lines from various germplasms, including another japonica cultivar, seven indica cultivars, and one Oryza rufipogon line. The probability of genomic duplication achieved by our PPGI method was higher than that obtained by colchicine treatment. Typically, autotetraploid lines exhibit severe sterility in the first generation following polyploidization. Leveraging fertile neo-tetraploid rice and the PPGI system, we designed and verified two strategies to directly induce fertile autotetraploid germplasms in the first generation, thereby substantially shortening the breeding cycle. Our method provides a universal, efficient, and non-toxic approach for inducing autotetraploid rice germplasms and contributes to enriching fertile autotetraploid rice germplasm resources.

Key words: artificial genomic duplication, autotetraploidy, OSD1, polyploidy manipulation

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