J Integr Plant Biol. ›› 2025, Vol. 67 ›› Issue (3): 826-844.DOI: 10.1111/jipb.13863

• Review Articles • Previous Articles     Next Articles

Plant–microbiome interactions and their impacts on plant adaptation to climate change

Qing Zeng1,2, Hang‐Wei Hu3, An‐Hui Ge4, Chao Xiong5, Chang‐Chun Zhai6, Gui‐Lan Duan1, Li‐Li Han1, Si‐Yun Huang1,2 and Li‐Mei Zhang1,2*   

  1. 1. State Key Laboratory of Regional and Urban Ecology, Research Center for Eco‐Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China
    2. University of Chinese Academy of Sciences, Beijing 100049, China
    3. School of Agriculture, Food and Ecosystem Sciences, Faculty of Science, The University of Melbourne, Parkville VIC 3010, Australia
    4. Key Laboratory of Plant Carbon Capture, CAS Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, Shanghai 200032, China
    5. Hawkesbury Institute for the Environment, Western Sydney University, Penrith NSW 2751, Australia
    6. School of Life Sciences, Institute of Life Science and Green Development, Hebei University, Baoding 071002, China

    *Correspondence : Li‐Mei Zhang (zhanglm@rcees.ac.cn)
  • Received:2025-01-15 Accepted:2025-01-20 Online:2025-02-21 Published:2025-03-01
  • Supported by:
    This work was financially supported by the National Natural Science Foundation of China (42277289, 42207142), and the National Key Research and Development Program of China (2023YFD1700801).

Abstract: Plants have co-evolved with a wide range of microbial communities over hundreds of millions of years, this has drastically influenced their adaptation to biotic and abiotic stress. The rapid development of multi-omics approaches has greatly improved our understanding of the diversity, composition, and functions of plant microbiomes, but how global climate change affects the assembly of plant microbiomes and their roles in regulating host plant adaptation to changing environmental conditions is not fully known. In this review, we summarize recent advancements in the community assembly of plant microbiomes, and their responses to climate change factors such as elevated CO2 levels, warming, and drought. We further delineate the research trends and hotspots in plant–microbiome interactions in the context of climate change, and summarize the key mechanisms by which plant microbiomes influence plant adaptation to the changing climate. We propose that future research is urgently needed to unravel the impact of key plant genes and signal molecules modulated by climate change on microbial communities, to elucidate the evolutionary response of plant–microbe interactions at the community level, and to engineer synthetic microbial communities to mitigate the effects of climate change on plant fitness.

Key words: drought, elevated CO2, phyllosphere microbiomes, plant fitness, plant–microbe interactions, warming

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