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Plastid and nuclear phylogenomics of Cyphostemma (Vitaceae) provide new insights into genome size evolution across sub-Saharan Africa
Rindra M. Ranaivoson, Romer N. Rabarijaona, Jin-Ren Yu, Yi-Chen You, Russell L. Barrett, Ju Zhou, Bing Liu, Wyckliffe Omondi Omollo, Chuan-Yu Du, Da-Ming Zhang, Mijoro Rakotoarinivo, Jie Cheng, Chao-Bin Li, Yang Dong, Ilia J. Leitch, Alexandre Antonelli, Jun Wen, Zhi-Duan Chen, Li-Min Lu
J Integr Plant Biol 2026, 68 (5): 1399-1420.  
doi: 10.1111/jipb.70111
Abstract (Browse 208)  |   Save
Genome size, the total amount of DNA content in the cell nucleus, varies greatly among flowering plants. One factor underlying this variation is the environment under which plants evolve. Given this premise, harsh environmental conditions in arid regions may profoundly influence genome evolution. However, the specific impact of aridification on genome size evolution, particularly for African lineages, remains largely unexplored. Here, we investigate linkages between genome size evolution and ecological adaptation using the genus Cyphostemma in the grape family (Vitaceae) as a model. Cyphostemma species exhibit genome size expansion and remarkable morphological traits in arid environments, including succulent stems or leaves and loss of tendrils. Our biogeographic reconstruction, based on substantial taxon sampling (112 of 200 species), reveals that Cyphostemma originated in continental Africa during the late Eocene to Oligocene and has undergone rapid radiation since the middle Miocene, coinciding with intensified aridification and geological activity in eastern Africa. Incorporating extensive data on traits, habitats, genome size, and chromosome numbers, we show that Cyphostemma species with the largest genomes are succulent polyploids restricted to nutrient-rich limestone outcrops. Broad-scale analyses across eudicots further confirm that larger genomes are significantly associated with both succulence and arid habitats. Our findings reveal a strong association between genome size expansion, polyploidy, and adaptive traits, indicating that genome size is a hitherto neglected trait associated with the radiation of succulent plants during the African aridification in the Cenozoic.
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Some African Cyphostemma species evolved much larger genomes as they adapted to dry, rocky habitats. These expansions are linked to succulent traits and specialization on nutrient-rich limestone outcrops. The findings show how climate-driven aridification shaped plant evolution and highlight broader genome-environment patterns across flowering plants.
  
Breaking plant family barriers: Sensor–helper NLR pairs enable cross-kingdom immune defense
Manman Zhang, Cheng Li, Fengquan Liu
J Integr Plant Biol 2026, 68 (1): 3-5.  
doi: 10.1111/jipb.70074
Abstract (Browse 294)  |   Save
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This commentary on Du et al. (2025) demonstrates that transferring paired sensor-helper NLRs from Solanaceae to non-asterid species (rice, soybean, and Arabidopsis) overcomes restricted taxonomic functionality, enabling resistance to bacterial leaf streak without fitness costs, and unlocking cross-kingdom immune potential for crop protection.
  
The spatial distributional pattern of seed plants and its future advances
Jun Wen
J Integr Plant Biol 2025, 67 (10): 2529-2531.  
doi: 10.1111/jipb.70013
Abstract (Browse 296)  |   Save
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This commentary showcases the Spermatophyte Spatial Evolutionary System by Huang et al. (2025), which integrates worldwide species richness information for 429 spermatophyte families. This represents a major step forward in synthesizing the global biodiversity of seed plant evolution and sets the foundation for biogeographic studies utilizing model clades.
  
Activation and suppression mechanisms of the NRG1 helper NLRs
Yu-Ru Wang, Ruize Zhang, Daowen Wang, Yong Wang, Zheng Qing Fu
J Integr Plant Biol 2025, 67 (8): 1985-1987.  
doi: 10.1111/jipb.13928
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This commentary examines two recent papers featuring intriguing discoveries on the molecular processes and structural foundations involved in the activation and suppression of the N-requirement gene 1 (NRG1) helper nucleotide-binding leucine-rich repeat receptor.
  
Plant synthetic biology-based biofortification, strategies and recent progresses
Kai Wang, Zhongchi liu
J Integr Plant Biol 2025, 67 (8): 1997-2004.  
doi: 10.1111/jipb.13934
Abstract (Browse 504)  |   Save
Hidden hunger, caused by chronic micronutrient deficiencies, affects billions of people worldwide and remains a critical public health issue despite progress in food production. Biofortification offers a promising solution by enhancing nutrient levels within plant tissues through traditional breeding or advanced biotechnologies. Recent advancements in plant synthetic biology have significantly improved biofortification strategies, enabling precise and targeted nutrient enrichment. This mini-review outlines five core strategies in synthetic biology-based biofortification: overexpression of endogenous biosynthetic genes, introduction of heterologous biosynthetic pathways, expression of nutrient-specific transporters, optimization of transcriptional regulation, and protein (directed) evolution. Vitamin B1 biofortification serves as a primary illustrative example due to its historical importance and ongoing relevance. Recent breakthroughs, particularly from Chinese research teams, are also highlighted. Together, these strategies offer transformative potential for addressing global nutritional challenges through precise, sustainable and innovative plant-based approaches.
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Improving multiple disease resistance in wheat by using multitask kinase fusion proteins
Yamei Zhuang, Qiaoli Wang, Jianjun Liu, Daowen Wang, Guang Qi
J Integr Plant Biol 2025, 67 (7): 1689-1690.  
doi: 10.1111/jipb.13907
Abstract (Browse 410)  |   Save
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Broad spectrum resistance genes are desirable in wheat breeding because they confer resistance against multiple pathogens. Kinase fusion proteins confer broad spectrum resistance in wheat. The resistance locus Pm4 encodes a kinase fusion protein that confers resistance to the fungal diseases powdery mildew and wheat blast.
  
Rice E3 ubiquitin ligases balance immunity and yield through non-proteolytic ubiquitination
Yuqing Yan, Hui Wang, Yan Bi, Leeza Tariq, Fengming Song
J Integr Plant Biol 2025, 67 (5): 1199-1201.  
doi: 10.1111/jipb.13831
Abstract (Browse 438)  |   Save
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The rice E3 ubiquitin ligases OsCIE1 and IPI7 mediate the non-proteolytic polyubiquitination of the pattern-recognition receptor kinase OsCERK1 and the transcription factor IPA1, respectively, in response to Magnaporthe oryzae infection, thereby fine-tuning rice growth-immunity trade-offs.
  
A synthetic biology approach for identifying de-SUMOylation enzymes of substrates
Junwen Huang, Junjie Huang, Jiayuan Wu, Mi Zhou, Siyi Luo, Jieming Jiang, Tongsheng Chen, Ling Shao, Jianbin Lai, Chengwei Yang
J Integr Plant Biol 2025, 67 (5): 1211-1213.  
doi: 10.1111/jipb.13838
Abstract (Browse 463)  |   Save
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A synthetic biology approach using a robust reconstitution system in Escherichia coli enables the identification of plant ubiquitin-like proteases responsible for removing the small ubiquitin-like modifier (SUMO) post-translational modifications from specific protein substrates.
  
More than flowering: CONSTANS plays multifaceted roles in plant development and stress responses
Bin Yu, Yilong Hu, Xingliang Hou
J Integr Plant Biol 2025, 67 (3): 425-439.  
doi: 10.1111/jipb.13798
Abstract (Browse 585)  |   Save
Plants have evolved a remarkable ability to sense and respond to changes in photoperiod, allowing adjustments to their growth and development based on seasonal and environmental cues. The floral transition is a pivotal stage in plant growth and development, signifying a shift from vegetative to reproductive growth. CONSTANS (CO), a central photoperiodic response factor conserved in various plants, mediates day-length signals to control the floral transition, although its mechanisms of action vary among plants with different day-length requirements. In addition, recent studies have uncovered roles for CO in organ development and stress responses. These pleiotropic roles in model plants and crops make CO a potentially fruitful target for molecular breeding aimed at modifying crop agronomic traits. This review systematically traces research on CO, from its discovery and functional studies to the exploration of its regulatory mechanisms and newly discovered functions, providing important insight into the roles of CO and laying a foundation for future research.
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This review traces research on CONSTANS (CO), from its discovery and functional studies to the exploration of its mechanisms in regulating flowering time and the circadian clock, and newly discovered functions, providing insight into the roles of CO and laying a foundation for future research.
  
In vivo haploid induction in cauliflower, kale, and broccoli
Guixiang Wang, Mei Zong, Shuo Han, Hong Zhao, Mengmeng Duan, Xin Liu, Ning Guo, Fan Liu
J Integr Plant Biol 2024, 66 (9): 1823-1826.  
doi: 10.1111/jipb.13730
Abstract (Browse 486)  |   Save
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Modifying the centromeric histone CENH3 or PHOSPHOLIPASE D genes in cauliflower (Brassica oleracea var. botrytis) created haploid induction lines, which can be widely used for in vivo haploid induction in cauliflower, kale, and broccoli, thus enabling rapid utilization of germplasm resources and improving breeding efficiency.
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